ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 3.00 4.62 0.01 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 3448.00 16.28 13.63 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 5009.00 23.65 19.80 85.86 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 548.00 10.06 2.17 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 28.00 0.00 0.11 75.68 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 55.00 0.01 0.22 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 90.00 0.01 0.36 86.54 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 110199.00 18.12 435.61 45.26 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 428.00 0.07 1.69 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 2.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 117.00 0.02 0.46 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 1853.00 76.98 7.32 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 859.00 0.06 3.40 99.19 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 478.00 7.26 1.89 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 867.00 13.16 3.43 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 510.00 5.56 2.02 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 5.00 0.03 0.02 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 1100.00 0.07 4.35 32.67 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 771.00 0.05 3.05 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 677.00 6.29 2.68 62.69 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 613.00 5.69 2.42 47.52 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 26.00 0.21 0.10 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1363.00 0.22 5.39 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 380328.00 62.77 1503.42 89.08 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 660.00 15.01 2.61 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA esophagus squamous epithelium (Tissue)