ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 6378.00 19.06 25.21 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 165.00 0.49 0.65 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 4.00 0.01 0.02 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 196.00 0.59 0.77 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 1.55 0.00 0.01 38.81 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 595.00 3.35 2.35 100.0 U2.6-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 56.00 0.32 0.22 20.74 ENST00000619323 lncRNA esophagus squamous epithelium (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 16760.00 95.16 66.25 98.1 ENST00000619323 lncRNA esophagus squamous epithelium (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 401.00 25.49 1.59 100.0 SCARNA4-202 scaRNA esophagus squamous epithelium (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 604.00 19.73 2.39 100.0 ENST00000625572 miRNA esophagus squamous epithelium (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 3044.00 86.53 12.03 100.0 ENST00000628177 snoRNA esophagus squamous epithelium (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 13358.00 85.49 52.80 100.0 ENST00000630615 snoRNA esophagus squamous epithelium (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 193.00 37.48 0.76 100.0 DMRT2-209 protein coding esophagus squamous epithelium (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 93.00 18.06 0.37 100.0 DMRT2-209 protein coding esophagus squamous epithelium (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 361.00 17.55 1.43 100.0 SNORD98-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 468.00 22.75 1.85 100.0 SNORD98-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 67797.72 61.69 268.00 63.57 MIR106AHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 3.46 0.00 0.01 24.73 MIR106AHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 9.37 0.01 0.04 66.94 MIR106AHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 458.00 44.60 1.81 100.0 MEG8-222 lncRNA esophagus squamous epithelium (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 94.00 9.15 0.37 100.0 MEG8-222 lncRNA esophagus squamous epithelium (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 1971.00 27.22 7.79 99.14 SNHG14-224 lncRNA esophagus squamous epithelium (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 2157.00 29.79 8.53 97.29 SNHG14-224 lncRNA esophagus squamous epithelium (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 1136.00 15.69 4.49 100.0 SNHG14-224 lncRNA esophagus squamous epithelium (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 696.00 9.61 2.75 96.0 SNHG14-224 lncRNA esophagus squamous epithelium (Tissue)