ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 229.00 50.89 0.91 100.0 SNHG21-206 retained intron esophagus squamous epithelium (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 5682.00 95.62 22.46 100.0 SNORD11B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1127.00 51.70 4.45 100.0 SNORD91B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 10912.00 46.77 43.13 56.29 SNORD91A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 2240.00 47.26 8.85 96.89 MIR486-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 19520.00 44.13 77.16 59.05 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 201.00 0.45 0.79 100.0 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 616.00 1.39 2.44 100.0 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 5452.00 12.33 21.55 79.8 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 144.00 1.44 0.57 58.3 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 1743.52 17.46 6.89 46.05 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 13.00 0.13 0.05 100.0 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 397.00 3.98 1.57 100.0 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 63.00 0.63 0.25 100.0 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 169.00 1.69 0.67 53.99 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 2068.28 20.72 8.18 54.63 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 3.00 100.00 0.01 100.0 MIR7974-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 1.00 50.00 0.00 100.0 MIR376A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 793.00 2.37 3.13 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1428.30 4.27 5.65 24.75 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 34.00 0.10 0.13 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 13.00 0.04 0.05 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 89.00 0.27 0.35 74.17 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 8.00 0.02 0.03 80.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 4165.26 12.45 16.47 72.18 U2.3-201 snRNA esophagus squamous epithelium (Tissue)