ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 786.00 46.26 3.11 100.0 HCN2-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 15.00 3.14 0.06 100.0 ATP5MC3-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 4296.00 83.91 16.98 100.0 CDC25A-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 5113.00 87.52 20.21 100.0 RUNX3-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 365.00 36.76 1.44 100.0 BLOC1S4-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 1290.00 60.71 5.10 100.0 ATAD5-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 312.00 45.22 1.23 100.0 SLITRK5-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 1882.00 59.11 7.44 100.0 HASPIN-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 437.00 99.09 1.73 100.0 ATG101-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 89.00 73.55 0.35 100.0 PRICKLE1-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 404.00 97.12 1.60 98.78 MIR133A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 217.00 26.99 0.86 100.0 PBLD-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 130495.00 86.07 515.84 97.91 MIRLET7BHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 13195.00 8.70 52.16 84.59 MIRLET7BHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 663.00 1.85 2.62 78.46 MIR375-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 34916.00 97.32 138.02 99.45 MIR375-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 1480.00 19.91 5.85 100.0 MIR30E-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 5411.00 72.78 21.39 100.0 MIR30E-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 381.00 46.41 1.51 100.0 MIR29A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 159.00 85.95 0.63 100.0 MIR345-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 12836.00 98.91 50.74 100.0 MIR16-2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 555.00 94.55 2.19 100.0 MIR340-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 7.00 1.19 0.03 100.0 MIR340-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 352.00 65.79 1.39 100.0 MIR107-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 244.00 74.85 0.96 76.01 MIR381-201 miRNA esophagus squamous epithelium (Tissue)