ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 35.00 0.27 0.33 100.0 SNHG29-232 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 6.00 0.03 0.06 100.0 SNHG14-234 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 9.00 0.04 0.09 100.0 SNHG14-234 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 1410.00 6.88 13.37 100.0 SNHG14-234 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 1.00 0.00 0.01 100.0 SNHG14-234 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 6.00 0.03 0.06 100.0 SNHG14-234 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 1.00 0.03 0.01 8.33 ENST00000655317 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 63.00 2.20 0.60 100.0 ENST00000655317 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 17.00 0.59 0.16 94.44 ENST00000655317 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 286.00 2.38 2.71 48.56 LINC01962-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 2776.00 23.12 26.32 100.0 LINC01962-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 917.00 7.64 8.69 100.0 LINC01962-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 4.00 0.05 0.04 100.0 SNHG14-241 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 2.00 28.57 0.02 100.0 MEG8-228 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 7.00 0.12 0.07 100.0 SNHG14-261 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 3.00 0.07 0.03 100.0 LIMD1-AS1-204 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 41.00 1.00 0.39 97.62 LIMD1-AS1-204 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 451.00 59.03 4.28 98.26 MIR99AHG-262 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 252.00 32.98 2.39 100.0 MIR99AHG-262 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 406.00 3.33 3.85 100.0 MIR9-2HG-225 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 11050.00 90.62 104.77 98.09 MIR9-2HG-225 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 5.00 29.41 0.05 100.0 MEG8-233 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 10.00 0.10 0.09 90.91 SNHG14-278 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 1.00 0.24 0.01 100.0 SNHG17-252 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 1.00 0.08 0.01 20.0 SNHG14-288 lncRNA mesendoderm (In vitro differentiated cells)