ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 32.00 8.96 0.30 100.0 SNORD71-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 16021.00 76.33 151.90 81.46 MIR194-2HG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 4398.00 20.95 41.70 60.53 MIR194-2HG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 6622.00 99.68 62.79 100.0 RPS7P15-201 processed pseudogene mesendoderm (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 173.00 1.38 1.64 100.0 SNORD62B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 1041.00 8.28 9.87 100.0 SNORD62B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 10215.00 81.22 96.85 95.82 SNORD62B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 26407.00 97.87 250.37 100.0 MRPL32-203 nonsense mediated decay mesendoderm (In vitro differentiated cells)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 1720.00 97.73 16.31 100.0 ENST00000436739 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 26.00 2.25 0.25 40.0 TMEM107-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 121.00 10.45 1.15 100.0 TMEM107-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 1.00 0.09 0.01 100.0 TMEM107-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 2.00 0.31 0.02 40.0 SNHG16-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 10.00 1.56 0.09 100.0 SNHG16-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 294.00 27.84 2.79 98.99 SNORD105B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 34.00 10.15 0.32 100.0 SNORD121B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 43.00 17.55 0.41 100.0 SNORD127-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 14.00 5.71 0.13 100.0 SNORD127-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 390.00 37.61 3.70 100.0 SNORD42B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 1858.00 53.71 17.62 100.0 RNY4P25-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 3.00 2.63 0.03 100.0 SNORD121A-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 45.00 2.06 0.43 76.27 SNORD126-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 20.00 0.92 0.19 58.82 SNORD126-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 12.00 4.82 0.11 85.71 SNORD124-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 10.00 0.40 0.09 100.0 RPL3-212 retained intron mesendoderm (In vitro differentiated cells)