ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 6057.00 91.37 57.43 100.0 NDE1-202 protein coding mesendoderm (In vitro differentiated cells)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 200.00 34.42 1.90 100.0 MIR450B-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 2025.00 63.94 19.20 100.0 MIR887-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 112.00 86.15 1.06 100.0 MIR889-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 6.00 2.51 0.06 100.0 SNORD111-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 2.00 0.15 0.02 50.0 SNORD88A-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 4154.00 97.58 39.39 100.0 MIR548K-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 1108.00 62.04 10.51 100.0 MIR320B2-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 126.00 93.33 1.19 100.0 MIR1271-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 2742.00 23.28 26.00 100.0 SNORD100-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2527.00 21.46 23.96 100.0 SNORD100-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 1144.00 9.71 10.85 100.0 SNORD100-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 169.00 1.43 1.60 100.0 SNORD100-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1018.00 54.38 9.65 100.0 SNORD111B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 140.00 11.96 1.33 100.0 RNU2-36P-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 1.00 0.09 0.01 100.0 RNU2-36P-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 4450.00 42.23 42.19 90.34 SNORD19C-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 1002.00 9.51 9.50 100.0 SNORD19C-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 9951.00 48.93 94.35 100.0 SNORD12B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 5.00 0.02 0.05 100.0 SNORD12B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 925.00 4.55 8.77 96.76 SNORD12B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 1.00 0.10 0.01 100.0 Y_RNA.609-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 193.00 37.26 1.83 100.0 Y_RNA.612-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 32.00 8.96 0.30 100.0 SNORD71-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 17.00 4.76 0.16 94.44 SNORD71-201 snoRNA mesendoderm (In vitro differentiated cells)