ENCFF503PBD

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 4513.00 56.97 42.79 100.0 MIR454-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 184.00 18.13 1.74 100.0 MIR501-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 17579.00 91.88 166.67 100.0 MIR769-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 61.00 58.65 0.58 100.0 KRTAP19-1-201 protein coding mesendoderm (In vitro differentiated cells)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 2429.00 24.92 23.03 100.0 MIR708-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 240.00 84.51 2.28 100.0 MIR509-3-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 6.00 33.33 0.06 100.0 MIR543-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 3696.00 96.05 35.04 100.0 MIR301B-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 587.00 32.32 5.57 77.44 RNU1-82P-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 467.00 28.41 4.43 48.7 SNORD66-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 6.00 0.36 0.06 100.0 SNORD66-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 8.00 0.49 0.08 100.0 SNORD66-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 1160.00 79.29 11.00 100.0 U3.17-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 871.00 44.37 8.26 100.0 SNORD17-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 4.00 0.07 0.04 100.0 SNORD72-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 227.00 9.21 2.15 97.42 RNY4P18-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 4.00 0.93 0.04 100.0 SNORD90-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 15.00 3.49 0.14 88.24 SNORD90-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 3591.00 29.70 34.05 100.0 SNORD69-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 350.00 2.89 3.32 100.0 SNORD69-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 321.00 2.65 3.04 100.0 SNORD69-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 2656.00 21.97 25.18 100.0 SNORD69-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 5.00 0.35 0.05 100.0 SNORD70-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 2.00 0.01 0.02 100.0 B4GALNT2-202 protein coding mesendoderm (In vitro differentiated cells)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 10585.00 74.72 100.36 80.38 B4GALNT2-202 protein coding mesendoderm (In vitro differentiated cells)