ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 1983.00 90.67 3.95 100.0 RNA5SP77-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 3735.00 22.93 7.44 98.39 SNORD114-22-201 snoRNA Peyer's patch (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 12287.00 75.44 24.46 100.0 SNORD114-22-201 snoRNA Peyer's patch (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 6055.00 81.44 12.06 100.0 SNORD6-201 snoRNA Peyer's patch (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 153.00 2.06 0.30 100.0 SNORD6-201 snoRNA Peyer's patch (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1556.00 6.09 3.10 100.0 SNORD82-201 snoRNA Peyer's patch (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 471.00 1.84 0.94 100.0 SNORD82-201 snoRNA Peyer's patch (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 214.00 0.84 0.43 100.0 SNORD82-201 snoRNA Peyer's patch (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 9530.00 37.33 18.98 98.19 SNORD82-201 snoRNA Peyer's patch (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 2334.00 9.14 4.65 90.75 SNORD82-201 snoRNA Peyer's patch (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 2447.05 9.58 4.87 31.87 SNORD82-201 snoRNA Peyer's patch (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 5046.73 19.77 10.05 65.73 SNORD82-201 snoRNA Peyer's patch (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 58961.00 96.57 117.40 97.73 MIR146B-201 miRNA Peyer's patch (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 3719.00 93.14 7.40 100.0 SNHG20-201 lncRNA Peyer's patch (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 53.00 28.96 0.11 100.0 ATP5MK-205 protein coding Peyer's patch (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 64.00 41.83 0.13 100.0 ATAD3A-202 protein coding Peyer's patch (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 38.00 14.02 0.08 50.67 TMC5-202 protein coding Peyer's patch (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 27.00 34.18 0.05 100.0 ZMYM2-203 protein coding Peyer's patch (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 194.00 8.72 0.39 100.0 RNVU1-7-201 snRNA Peyer's patch (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 87.00 58.78 0.17 100.0 Y_RNA.389-201 misc RNA Peyer's patch (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 203.00 0.26 0.40 100.0 SNORD101-201 snoRNA Peyer's patch (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 346.00 0.45 0.69 100.0 SNORD101-201 snoRNA Peyer's patch (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 73507.00 95.37 146.36 99.5 SNORD101-201 snoRNA Peyer's patch (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 52650.00 96.83 104.83 100.0 SNORD37-201 snoRNA Peyer's patch (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 74146.00 96.16 147.63 99.98 SNORD59A-201 snoRNA Peyer's patch (Tissue)