ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 4377.00 15.24 8.72 64.88 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 5238.00 93.22 10.43 100.0 SNORD114-14-201 snoRNA Peyer's patch (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1044.00 3.27 2.08 100.0 SNORD104-201 snoRNA Peyer's patch (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 100.00 0.31 0.20 100.0 SNORD104-201 snoRNA Peyer's patch (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 15503.00 52.21 30.87 63.23 RNA5SP358-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 48.00 3.28 0.10 36.36 RNA5SP145-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 1.00 1.05 0.00 100.0 RNY4P9-201 misc RNA Peyer's patch (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 1361.00 21.56 2.71 100.0 RNU5B-1-201 snRNA Peyer's patch (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 65.00 1.03 0.13 100.0 RNU5B-1-201 snRNA Peyer's patch (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 2011.00 31.85 4.00 100.0 RNU5B-1-201 snRNA Peyer's patch (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 39.00 4.79 0.08 97.5 RNY4P27-201 misc RNA Peyer's patch (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 1.00 0.12 0.00 50.0 RNY4P27-201 misc RNA Peyer's patch (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 216.00 11.12 0.43 100.0 Y_RNA.136-201 misc RNA Peyer's patch (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 3666.00 95.02 7.30 99.57 SNORD114-25-201 snoRNA Peyer's patch (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 576.00 83.84 1.15 100.0 SNORD113-7-201 snoRNA Peyer's patch (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 73.00 46.79 0.15 100.0 Y_RNA.181-201 misc RNA Peyer's patch (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 136.00 8.08 0.27 100.0 RNY1-201 misc RNA Peyer's patch (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 442.54 26.29 0.88 70.02 RNY1-201 misc RNA Peyer's patch (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 191.62 11.39 0.38 38.48 RNY1-201 misc RNA Peyer's patch (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 33.00 1.96 0.07 100.0 RNY1-201 misc RNA Peyer's patch (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 714.00 1.55 1.42 100.0 RNA5SP202-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 137.00 0.30 0.27 100.0 RNA5SP202-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1844.00 4.00 3.67 100.0 RNA5SP202-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 2083.37 4.51 4.15 39.5 RNA5SP202-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 598.93 1.30 1.19 43.15 RNA5SP202-201 rRNA pseudogene Peyer's patch (Tissue)