ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 375.00 74.40 0.75 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 4.00 0.03 0.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 62.00 0.50 0.12 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 10.00 0.08 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 138.00 1.10 0.27 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 238.00 1.90 0.47 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 2.00 0.02 0.00 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 685.00 0.05 1.36 75.19 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 652.00 0.04 1.30 51.38 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 1305.00 0.09 2.60 94.09 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 7124.00 59.26 14.18 87.09 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 4112.00 97.33 8.19 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 7717.00 67.49 15.37 89.43 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 1143.00 97.28 2.28 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 19240.00 62.98 38.31 87.51 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 8.00 0.03 0.02 9.64 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 75.00 0.25 0.15 90.36 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 4336.65 38.81 8.63 54.56 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 4593.80 41.12 9.15 54.83 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1188.00 10.63 2.37 95.81 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 358053.00 89.71 712.92 91.09 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 627.00 29.12 1.25 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 9515.00 44.79 18.95 68.41 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 99.00 0.00 0.20 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 81.00 0.01 0.16 79.41 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA Peyer's patch (Tissue)