ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 1082.00 62.76 2.15 80.39 MIR99AHG-262 lncRNA Peyer's patch (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 202.00 11.72 0.40 100.0 MIR99AHG-262 lncRNA Peyer's patch (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 37.00 41.57 0.07 92.5 MIR9-2HG-225 lncRNA Peyer's patch (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 702.00 45.79 1.40 100.0 MEG8-233 lncRNA Peyer's patch (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 224.00 14.61 0.45 100.0 MEG8-233 lncRNA Peyer's patch (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 1102.00 48.16 2.19 100.0 MEG8-234 lncRNA Peyer's patch (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 334.00 14.60 0.67 100.0 MEG8-234 lncRNA Peyer's patch (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 104.00 45.02 0.21 100.0 MEG8-240 lncRNA Peyer's patch (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 37.00 45.68 0.07 100.0 SNHG14-306 lncRNA Peyer's patch (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 12.00 1.04 0.02 100.0 ENST00000666735 lncRNA Peyer's patch (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 78.00 6.75 0.16 100.0 ENST00000666735 lncRNA Peyer's patch (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 1390.00 82.30 2.77 100.0 MEG8-242 lncRNA Peyer's patch (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 284.00 0.75 0.57 100.0 MEG8-244 lncRNA Peyer's patch (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 92.00 0.24 0.18 100.0 MEG8-244 lncRNA Peyer's patch (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 36951.00 97.66 73.57 99.9 MEG8-244 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 20713.00 0.64 41.24 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 365.00 0.01 0.73 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 5612.00 0.17 11.17 98.59 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 2918.62 0.09 5.81 70.75 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 12119.00 0.37 24.13 71.57 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 2902673.00 89.07 5779.55 99.84 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1282.00 0.04 2.55 79.68 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 68653.00 2.11 136.70 99.24 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 6546.00 0.20 13.03 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 48930.00 1.50 97.43 99.9 SNHG1-248 lncRNA Peyer's patch (Tissue)