ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 48366.00 96.23 96.30 99.35 SNORD19C-201 snoRNA Peyer's patch (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 4218.00 82.51 8.40 100.0 SNORD12B-201 snoRNA Peyer's patch (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 4.00 2.16 0.01 100.0 Y_RNA.609-201 misc RNA Peyer's patch (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 6.00 54.55 0.01 100.0 Y_RNA.612-201 misc RNA Peyer's patch (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 169.00 9.99 0.34 100.0 SNORD71-201 snoRNA Peyer's patch (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 291.00 17.21 0.58 100.0 SNORD71-201 snoRNA Peyer's patch (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 101288.00 13.26 201.68 28.66 MIR194-2HG-201 lncRNA Peyer's patch (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 655356.00 85.78 1304.89 95.54 MIR194-2HG-201 lncRNA Peyer's patch (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 4.00 100.00 0.01 100.0 RPS7P15-201 processed pseudogene Peyer's patch (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 559.00 16.87 1.11 87.07 SNORD62B-201 snoRNA Peyer's patch (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 605.00 18.26 1.20 100.0 SNORD62B-201 snoRNA Peyer's patch (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 11.00 0.33 0.02 100.0 SNORD62B-201 snoRNA Peyer's patch (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 448.00 13.52 0.89 100.0 SNORD62B-201 snoRNA Peyer's patch (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 7.00 100.00 0.01 100.0 MRPL32-203 nonsense mediated decay Peyer's patch (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 35.00 81.40 0.07 100.0 ENST00000436739 lncRNA Peyer's patch (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 108.00 0.43 0.22 100.0 TMEM107-204 protein coding Peyer's patch (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 10739.00 42.67 21.38 76.61 TMEM107-204 protein coding Peyer's patch (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 5380.00 21.37 10.71 92.11 TMEM107-204 protein coding Peyer's patch (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 16.00 0.06 0.03 100.0 TMEM107-204 protein coding Peyer's patch (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 1811.00 85.42 3.61 100.0 SNHG16-201 lncRNA Peyer's patch (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 57936.00 81.13 115.36 92.63 SNORD105B-201 snoRNA Peyer's patch (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 244.00 42.88 0.49 65.77 SNORD121B-201 snoRNA Peyer's patch (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 287.00 34.00 0.57 100.0 SNORD127-201 snoRNA Peyer's patch (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 15736.00 95.38 31.33 100.0 SNORD42B-201 snoRNA Peyer's patch (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 153.00 8.62 0.30 100.0 RNY4P25-201 misc RNA Peyer's patch (Tissue)