ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 4623.00 87.23 28.97 93.49 MIR27B-201 miRNA testis (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 143.00 2.70 0.90 100.0 MIR27B-201 miRNA testis (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 74.00 91.36 0.46 100.0 MIR196A2-201 miRNA testis (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 83.00 69.17 0.52 81.37 MIR654-201 miRNA testis (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 5934.00 96.11 37.18 97.5 MIR204-201 miRNA testis (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 184.00 95.34 1.15 100.0 MIR152-201 miRNA testis (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 277.00 86.29 1.74 100.0 MIR30C1-201 miRNA testis (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 24.00 64.86 0.15 100.0 MIR660-201 miRNA testis (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 421.00 11.90 2.64 100.0 MIR125B1-201 miRNA testis (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 2398.00 67.78 15.03 87.07 MIR125B1-201 miRNA testis (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 13.00 44.83 0.08 100.0 MIR493-201 miRNA testis (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 9.00 31.03 0.06 100.0 MIR493-201 miRNA testis (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 803.41 20.37 5.03 28.33 MIR182-201 miRNA testis (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 2113.42 53.57 13.24 68.31 MIR182-201 miRNA testis (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 2494.00 88.35 15.63 91.86 MIR100-201 miRNA testis (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 39.00 97.50 0.24 100.0 MIR301A-201 miRNA testis (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 1072.00 92.81 6.72 97.01 MIR130A-201 miRNA testis (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 79.00 6.84 0.50 56.43 MIR130A-201 miRNA testis (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 71730.00 98.26 449.45 98.8 MIRLET7F2-201 miRNA testis (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 7.00 77.78 0.04 100.0 MIR652-201 miRNA testis (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 6.00 75.00 0.04 100.0 MIR653-201 miRNA testis (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 387.00 56.41 2.42 100.0 MIR140-201 miRNA testis (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 4.00 3.88 0.03 100.0 MIR106B-201 miRNA testis (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 26.00 25.24 0.16 39.39 MIR106B-201 miRNA testis (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 3768.00 28.68 23.61 100.0 SNORD41-201 snoRNA testis (Tissue)