ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 520.00 19.03 3.26 83.87 7SK.1-201 misc RNA testis (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 54.00 43.20 0.34 100.0 RNA5SP77-201 rRNA pseudogene testis (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 56286.00 62.64 352.68 98.67 SNORD114-22-201 snoRNA testis (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 31364.00 34.91 196.52 100.0 SNORD114-22-201 snoRNA testis (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 6847.00 85.25 42.90 100.0 SNORD6-201 snoRNA testis (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 179.00 2.23 1.12 100.0 SNORD6-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 125.00 0.45 0.78 100.0 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6148.65 22.02 38.53 73.29 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 8584.00 30.74 53.79 99.32 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 281.00 1.01 1.76 100.0 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 2644.00 9.47 16.57 89.32 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 2186.95 7.83 13.70 26.07 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 4532.00 16.23 28.40 100.0 SNORD82-201 snoRNA testis (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 3996.00 95.62 25.04 97.65 MIR146B-201 miRNA testis (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 39.00 26.90 0.24 100.0 SNHG20-201 lncRNA testis (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 13.00 16.88 0.08 100.0 ATP5MK-205 protein coding testis (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 71.00 45.22 0.44 100.0 ATAD3A-202 protein coding testis (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 7.00 10.45 0.04 43.75 TMC5-202 protein coding testis (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 40.00 75.47 0.25 100.0 ZMYM2-203 protein coding testis (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 127.00 6.01 0.80 100.0 RNVU1-7-201 snRNA testis (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 40.00 70.18 0.25 100.0 Y_RNA.389-201 misc RNA testis (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 71843.00 97.12 450.16 99.82 SNORD101-201 snoRNA testis (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 135.00 0.18 0.85 100.0 SNORD101-201 snoRNA testis (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 219.00 0.30 1.37 100.0 SNORD101-201 snoRNA testis (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 53970.00 97.12 338.17 100.0 SNORD37-201 snoRNA testis (Tissue)