ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 176.00 77.53 1.10 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 12.00 23.08 0.08 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 17.00 17.71 0.11 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 195.00 1.86 1.22 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 29.00 0.28 0.18 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 7.00 0.07 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 47.00 0.45 0.29 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 17.00 0.16 0.11 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 78.00 0.13 0.49 61.42 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 104.00 0.18 0.65 58.76 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 428.00 0.73 2.68 87.35 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 174.00 21.40 1.09 65.41 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 1002.00 94.53 6.28 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 21.00 13.82 0.13 95.45 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 145.00 97.32 0.91 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 61.00 0.83 0.38 100.0 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 2884.00 39.23 18.07 57.55 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 126.00 10.89 0.79 86.9 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 220.43 19.05 1.38 50.21 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 204.25 17.65 1.28 46.85 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 34880.00 97.51 218.55 99.44 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 143.00 10.27 0.90 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 214.00 16.49 1.34 60.8 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 232.00 0.19 1.45 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 197.00 0.22 1.23 67.93 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA testis (Tissue)