ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 2.00 0.36 0.01 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 11.00 0.10 0.07 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 95.00 2.66 0.60 20.21 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 27.00 0.75 0.17 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 14.00 0.39 0.09 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 5.00 0.14 0.03 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 916.00 25.60 5.74 98.92 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 86.00 2.40 0.54 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 3.00 0.23 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 227.00 17.49 1.42 51.47 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 1.00 0.08 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 97.00 3.56 0.61 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 69.00 2.53 0.43 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 12.00 0.44 0.08 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 115.00 4.22 0.72 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 1425.00 52.27 8.93 96.35 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 733.00 33.49 4.59 90.38 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 2.00 0.60 0.01 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 20.00 5.97 0.13 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 8.00 2.39 0.05 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 80.00 23.88 0.50 89.89 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 215.00 0.37 1.35 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 111.00 31.99 0.70 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 1.00 1.33 0.01 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 103.00 4.12 0.65 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA testis (Tissue)