ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 30.00 1.24 0.19 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 371.00 45.47 2.32 76.65 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 286.00 0.23 1.79 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 10.00 58.82 0.06 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 138.00 16.97 0.86 89.61 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 163.00 20.05 1.02 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 932.00 65.77 5.84 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 8.00 0.01 0.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 47.00 0.05 0.29 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 26.00 0.03 0.16 65.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 43.00 0.05 0.27 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 11.00 0.01 0.07 47.83 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 30283.00 34.37 189.75 53.9 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 33.00 52.38 0.21 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 76.00 0.18 0.48 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 75.00 20.11 0.47 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 63.00 16.89 0.39 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 233.00 35.96 1.46 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 1.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 109.00 0.26 0.68 24.83 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 180.00 16.01 1.13 46.27 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 209.00 18.59 1.31 63.91 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 755.00 0.86 4.73 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 46875.00 53.26 293.71 94.87 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 33.00 19.19 0.21 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA testis (Tissue)