ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 160.83 3.30 1.01 31.41 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 88.00 1.81 0.55 83.02 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 267.59 5.50 1.68 22.64 ENST00000823279 lncRNA testis (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 1207.21 24.79 7.56 75.4 ENST00000823801 lncRNA testis (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 100.00 65.36 0.63 80.0 ENST00000827714 lncRNA testis (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 25.00 16.34 0.16 20.0 ENST00000827714 lncRNA testis (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 178.00 1.43 1.12 100.0 GAS5-377 lncRNA testis (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 523.00 4.20 3.28 100.0 GAS5-377 lncRNA testis (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 11413.00 91.75 71.51 100.0 GAS5-377 lncRNA testis (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 1.00 25.00 0.01 100.0 MIR205HG-245 lncRNA testis (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 32.00 0.78 0.20 100.0 ZFAS1-238 lncRNA testis (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 109.00 2.66 0.68 100.0 ZFAS1-238 lncRNA testis (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1465.00 35.78 9.18 100.0 ZFAS1-238 lncRNA testis (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 7123.00 91.30 44.63 100.0 ZFAS1-242 lncRNA testis (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 4.00 0.05 0.03 100.0 ZFAS1-242 lncRNA testis (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 539.00 54.55 3.38 100.0 ENST00000837997 lncRNA testis (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 188.00 19.03 1.18 100.0 ENST00000837997 lncRNA testis (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 760.00 67.14 4.76 75.7 ENST00000839036 lncRNA testis (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 2.00 1.89 0.01 100.0 ENST00000849527 lncRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 16276.00 92.45 101.98 98.61 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 26.00 0.15 0.16 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 9.00 0.01 0.06 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 856.00 68.48 5.36 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 164.00 13.12 1.03 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 8.00 5.23 0.05 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA testis (Tissue)