ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 276596.00 48.98 1733.11 98.96 SNHG12-223 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 26224.00 71.27 164.32 100.0 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 67.00 0.18 0.42 33.17 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 534.00 1.45 3.35 100.0 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 302.97 0.82 1.90 41.39 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 195.95 0.53 1.23 29.03 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 427.01 1.16 2.68 39.14 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 2336.00 6.35 14.64 68.77 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 160.00 0.43 1.00 100.0 SNHG25-206 lncRNA testis (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 89.00 85.58 0.56 89.9 MIR155HG-205 lncRNA testis (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 16.00 2.35 0.10 72.73 ENST00000786284 lncRNA testis (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 316.00 46.40 1.98 100.0 ENST00000786284 lncRNA testis (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 6.00 0.88 0.04 40.0 ENST00000786284 lncRNA testis (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 4862.93 45.06 30.47 55.84 ENST00000797550 lncRNA testis (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 4318.59 40.02 27.06 49.59 ENST00000797550 lncRNA testis (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 165.00 1.53 1.03 66.0 ENST00000797550 lncRNA testis (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 32356.00 83.82 202.74 91.95 MIR181A1HG-212 lncRNA testis (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 116.00 0.30 0.73 100.0 MIR181A1HG-212 lncRNA testis (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 94.00 55.62 0.59 100.0 C19orf48P-218 lncRNA testis (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1149.00 65.62 7.20 91.85 SNHG18-220 lncRNA testis (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 117.00 15.64 0.73 100.0 ENST00000817026 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 12.00 0.25 0.08 100.0 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 131.91 2.71 0.83 44.42 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 158.73 3.26 0.99 56.89 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 249.88 5.13 1.57 52.17 ENST00000823279 lncRNA testis (Tissue)