ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 5022.00 60.37 31.47 86.16 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 42.00 0.50 0.26 40.38 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1751.00 21.05 10.97 57.04 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 257.00 3.09 1.61 100.0 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 443.00 5.33 2.78 100.0 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 46.00 0.55 0.29 100.0 CTC1-214 protein coding testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 418.00 2.07 2.62 55.96 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1413.00 7.01 8.85 90.75 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 45.00 0.22 0.28 100.0 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 319.00 1.58 2.00 33.86 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 12.00 0.06 0.08 100.0 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 22.00 0.11 0.14 100.0 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 10.00 0.05 0.06 100.0 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 3573.00 17.72 22.39 46.97 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 62.00 0.31 0.39 100.0 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 10587.00 52.51 66.34 83.78 ENST00000651540 lncRNA testis (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 905.00 0.53 5.67 100.0 MIRLET7A1HG-203 lncRNA testis (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 7704.00 95.89 48.27 100.0 MEG8-225 lncRNA testis (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 4202.00 82.28 26.33 100.0 SNHG29-232 lncRNA testis (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 222.00 4.35 1.39 100.0 SNHG29-232 lncRNA testis (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 212.00 4.15 1.33 100.0 SNHG29-232 lncRNA testis (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 1.00 0.02 0.01 100.0 SNHG29-232 lncRNA testis (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 468.00 5.12 2.93 100.0 SNHG14-234 lncRNA testis (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 55.00 0.60 0.34 100.0 SNHG14-234 lncRNA testis (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 1544.00 15.43 9.67 100.0 ENST00000655317 lncRNA testis (Tissue)