ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 95.00 0.23 0.60 100.0 MT-TY-201 Mt tRNA testis (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 23.00 40.35 0.14 100.0 MT-TD-201 Mt tRNA testis (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 55.00 0.54 0.34 100.0 MT-TK-201 Mt tRNA testis (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 18.00 0.18 0.11 100.0 MT-TK-201 Mt tRNA testis (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 3610.00 35.35 22.62 100.0 MT-TK-201 Mt tRNA testis (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 4655.00 45.59 29.17 100.0 MT-TK-201 Mt tRNA testis (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 142.00 9.06 0.89 94.04 MT-TS2-201 Mt tRNA testis (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 47.00 3.00 0.29 100.0 MT-TS2-201 Mt tRNA testis (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 227.00 14.48 1.42 100.0 MT-TS2-201 Mt tRNA testis (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 67.00 14.76 0.42 100.0 MT-TL2-201 Mt tRNA testis (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 158.00 0.04 0.99 100.0 MT-TE-201 Mt tRNA testis (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 336274.00 84.20 2107.05 89.16 MT-TE-201 Mt tRNA testis (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 1113.00 0.28 6.97 84.19 MT-TE-201 Mt tRNA testis (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 42.00 0.01 0.26 100.0 MT-TE-201 Mt tRNA testis (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 137.00 0.03 0.86 51.12 MT-TE-201 Mt tRNA testis (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 131.00 0.03 0.82 53.25 MT-TE-201 Mt tRNA testis (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 540.00 0.14 3.38 100.0 MT-TE-201 Mt tRNA testis (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 10.00 27.78 0.06 100.0 MIR196A1-201 miRNA testis (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 704.00 45.24 4.41 100.0 MT-RNR1-201 Mt rRNA testis (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 3.00 37.50 0.02 100.0 MIR454-201 miRNA testis (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 66.00 44.00 0.41 100.0 MIR501-201 miRNA testis (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 220.00 83.65 1.38 100.0 MIR769-201 miRNA testis (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 55.00 63.95 0.34 100.0 KRTAP19-1-201 protein coding testis (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 2.00 50.00 0.01 100.0 MIR708-201 miRNA testis (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 60974.00 78.48 382.06 100.0 MIR509-3-201 miRNA testis (Tissue)