ENCFF478BJL

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR229WIW
Description: Part of ENCODE experiment ENCSR229WIW. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 27.00 6.09 0.17 57.45 MT-TF-201 Mt tRNA testis (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 48.00 10.84 0.30 48.48 MT-TF-201 Mt tRNA testis (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 23.00 5.19 0.14 100.0 MT-TF-201 Mt tRNA testis (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 250.00 25.51 1.57 100.0 MT-TV-201 Mt tRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 2.00 0.04 0.01 100.0 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 896.00 19.00 5.61 93.33 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 455.00 9.65 2.85 75.71 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 19.00 0.40 0.12 100.0 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 216.00 4.58 1.35 100.0 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 57.00 1.21 0.36 100.0 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 19.00 0.40 0.12 100.0 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 134.00 26.38 0.84 94.37 MT-TI-201 Mt tRNA testis (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 98.00 19.29 0.61 100.0 MT-TI-201 Mt tRNA testis (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 17.00 0.08 0.11 100.0 MT-TQ-201 Mt tRNA testis (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 6413.00 30.54 40.18 87.3 MT-TQ-201 Mt tRNA testis (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 4746.25 22.61 29.74 73.05 MT-TQ-201 Mt tRNA testis (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 1205.76 5.74 7.56 48.8 MT-TQ-201 Mt tRNA testis (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 361.00 35.22 2.26 60.37 MT-TM-201 Mt tRNA testis (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 80.00 7.80 0.50 100.0 MT-TM-201 Mt tRNA testis (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 118.00 7.71 0.74 100.0 MT-TC-201 Mt tRNA testis (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 11257.00 26.71 70.53 83.09 MT-TY-201 Mt tRNA testis (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 95.00 0.23 0.60 100.0 MT-TY-201 Mt tRNA testis (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 7469.00 17.72 46.80 92.79 MT-TY-201 Mt tRNA testis (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 16.00 0.04 0.10 100.0 MT-TY-201 Mt tRNA testis (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 18078.00 42.90 113.27 100.0 MT-TY-201 Mt tRNA testis (Tissue)