ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 1.00 8.33 0.00 100.0 SNORD115-42-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 4925.05 4.73 16.24 45.07 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1897.00 1.82 6.25 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 1134.00 1.09 3.74 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 2120.00 2.04 6.99 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 639.00 0.61 2.11 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 729.00 0.70 2.40 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 4467.65 4.29 14.73 54.86 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 1386.00 1.33 4.57 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 5160.92 4.96 17.01 60.72 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 816.00 84.47 2.69 100.0 SNORD114-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 88.00 9.11 0.29 100.0 SNORD114-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 149.00 0.88 0.49 100.0 Y_RNA.234-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 1794.00 2.44 5.91 100.0 RNA5S9-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 146.00 2.23 0.48 100.0 RNA5SP141-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 107.00 91.45 0.35 100.0 SNORD114-15-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 470.00 69.73 1.55 100.0 ENST00000364722 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 8.00 53.33 0.03 100.0 SNORD115-15-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 217.00 63.64 0.72 100.0 SNORD113-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 5791.00 79.17 19.09 100.0 SNORD52-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 1392.00 54.46 4.59 73.89 SNORD117-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 492.00 19.25 1.62 31.06 SNORD117-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 4.00 1.04 0.01 100.0 SNORD114-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 62.00 16.15 0.20 100.0 SNORD114-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 296.00 77.08 0.98 97.69 SNORD114-3-201 snoRNA esophagus squamous epithelium (Tissue)