ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 5.00 38.46 0.02 100.0 SNORD115-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 42038.00 69.51 138.58 84.11 RNA5SP358-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 1133.00 9.51 3.73 87.83 RNA5SP145-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 1.00 16.67 0.00 100.0 Y_RNA.105-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 8.00 1.87 0.03 100.0 RNY4P9-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 7.00 0.16 0.02 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 1.00 0.02 0.00 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1290.00 30.13 4.25 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 299.00 6.98 0.99 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 384.00 85.33 1.27 92.98 SNORD115-18-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 1.00 0.15 0.00 100.0 RNY4P27-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 21.00 3.17 0.07 100.0 RNY4P27-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 31.00 3.42 0.10 100.0 Y_RNA.136-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 1.00 9.09 0.00 100.0 SNORD115-41-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 7.00 53.85 0.02 100.0 SNORD115-33-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 546.00 89.07 1.80 96.64 SNORD114-25-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 1492.00 97.58 4.92 100.0 SNORD113-7-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 18.00 6.36 0.06 100.0 Y_RNA.181-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 3.00 20.00 0.01 100.0 SNORD115-16-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 3.00 30.00 0.01 100.0 SNORD115-32-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 9.00 0.32 0.03 100.0 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 32.00 1.14 0.11 100.0 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1287.39 45.99 4.24 85.14 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 300.81 10.75 0.99 21.99 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 21.00 0.75 0.07 100.0 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)