ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 573.00 0.11 1.89 23.73 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 499.00 19.79 1.64 73.82 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 282.00 11.18 0.93 36.11 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 520.00 13.91 1.71 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 45880.00 63.58 151.24 89.85 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 430.00 0.60 1.42 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 271.00 15.21 0.89 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 54.00 5.90 0.18 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 138.00 0.39 0.45 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 39.00 0.37 0.13 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 367.00 3.44 1.21 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 54.00 0.51 0.18 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 300.00 2.81 0.99 67.26 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 192.00 1.80 0.63 58.9 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 48.00 0.45 0.16 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1945.00 14.45 6.41 55.19 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 4762.00 35.39 15.70 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 2355.00 21.76 7.76 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 41.00 0.28 0.14 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 6.00 0.04 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 417.00 2.81 1.37 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 11394.00 76.74 37.56 95.52 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 276.00 1.86 0.91 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1908.00 20.84 6.29 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 4395.00 45.58 14.49 77.51 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA esophagus squamous epithelium (Tissue)