ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 411.00 49.52 1.35 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 88.00 10.60 0.29 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 255.00 21.13 0.84 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 231.00 7.48 0.76 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 143.00 18.22 0.47 62.17 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 131.00 0.13 0.43 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 1.00 6.25 0.00 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 2342.00 16.10 7.72 83.05 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 51.00 0.35 0.17 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 5051.00 34.71 16.65 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 971.00 35.22 3.20 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 362.00 0.50 1.19 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 1503.00 2.06 4.95 86.98 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 125.00 0.17 0.41 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 2544.00 3.48 8.39 95.25 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 6665.00 9.12 21.97 20.7 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 272.00 0.37 0.90 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 29.00 0.04 0.10 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 801.00 84.85 2.64 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 3045.00 0.57 10.04 98.38 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 177.00 15.39 0.58 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 215.00 18.70 0.71 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 208.00 13.94 0.69 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 290.00 3.17 0.96 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 959.00 0.18 3.16 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus squamous epithelium (Tissue)