ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 421.00 13.05 1.39 71.97 SNHG14-288 lncRNA esophagus squamous epithelium (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 2641.00 81.87 8.71 95.55 SNHG14-288 lncRNA esophagus squamous epithelium (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 96.00 57.14 0.32 100.0 MEG8-240 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 3.00 1.38 0.01 100.0 SNHG14-303 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 3.00 7.50 0.01 100.0 SNHG14-306 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 20.00 50.00 0.07 100.0 SNHG14-306 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 348.00 6.82 1.15 100.0 ENST00000666735 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 70.00 1.37 0.23 100.0 ENST00000666735 lncRNA esophagus squamous epithelium (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 56.00 71.79 0.18 100.0 MEG8-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 212.99 35.09 0.70 45.61 SNHG14-312 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 233.20 38.42 0.77 49.94 SNHG14-312 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 21.00 0.35 0.07 100.0 MEG8-244 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 30.00 0.50 0.10 100.0 MEG8-244 lncRNA esophagus squamous epithelium (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 5810.00 97.58 19.15 99.28 MEG8-244 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1141.00 0.06 3.76 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 26.00 0.00 0.09 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 7201.00 0.37 23.74 98.4 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 576.70 0.03 1.90 57.44 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1001.00 0.05 3.30 90.34 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 653240.00 33.80 2153.39 99.61 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 424.00 0.02 1.40 53.74 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 89503.00 4.63 295.04 99.75 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 5533.00 0.29 18.24 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 826025.00 42.74 2722.97 99.89 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 319.00 0.02 1.05 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)