ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 1540.00 73.79 11.91 100.0 RNA5SP77-201 rRNA pseudogene GM23338 (Cell line)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 4.00 66.67 0.03 100.0 SNORD114-22-201 snoRNA GM23338 (Cell line)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 3550.00 68.07 27.45 100.0 SNORD6-201 snoRNA GM23338 (Cell line)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 295.00 5.66 2.28 100.0 SNORD6-201 snoRNA GM23338 (Cell line)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 93.00 6.94 0.72 100.0 RNY3-201 misc RNA GM23338 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 1111.00 10.17 8.59 100.0 SNORD82-201 snoRNA GM23338 (Cell line)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 330.00 3.02 2.55 73.66 SNORD82-201 snoRNA GM23338 (Cell line)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 100.00 0.92 0.77 67.57 SNORD82-201 snoRNA GM23338 (Cell line)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 337.00 3.08 2.61 100.0 SNORD82-201 snoRNA GM23338 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 1624.12 14.86 12.56 38.44 SNORD82-201 snoRNA GM23338 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 2695.48 24.67 20.84 63.8 SNORD82-201 snoRNA GM23338 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 2256.00 20.65 17.44 100.0 SNORD82-201 snoRNA GM23338 (Cell line)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 1648.00 98.56 12.74 99.46 MIR146B-201 miRNA GM23338 (Cell line)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 35.00 12.73 0.27 100.0 SNHG20-201 lncRNA GM23338 (Cell line)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 92.00 22.33 0.71 100.0 ATP5MK-205 protein coding GM23338 (Cell line)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 52.00 12.62 0.40 100.0 ATP5MK-205 protein coding GM23338 (Cell line)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 635.00 36.75 4.91 100.0 LINC01556-201 lncRNA GM23338 (Cell line)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 1712.00 71.07 13.24 100.0 ATAD3A-202 protein coding GM23338 (Cell line)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 53.00 13.32 0.41 63.1 TMC5-202 protein coding GM23338 (Cell line)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 4428.00 91.87 34.24 100.0 ZMYM2-203 protein coding GM23338 (Cell line)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 82.00 1.03 0.63 100.0 RNVU1-7-201 snRNA GM23338 (Cell line)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 460.00 65.34 3.56 100.0 SNORD24-201 snoRNA GM23338 (Cell line)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 2617.00 92.77 20.24 100.0 Y_RNA.389-201 misc RNA GM23338 (Cell line)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 100.00 0.10 0.77 100.0 SNORD101-201 snoRNA GM23338 (Cell line)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 471.00 0.47 3.64 100.0 SNORD101-201 snoRNA GM23338 (Cell line)