ENCFF450POH
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | GM23338 (Cell line) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR722POQ |
| Description: | Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000364461.1 | ENST00000364461.1_2_82_+ | 2–82 | 1.00 | 50.00 | 0.01 | 100.0 | SNORD115-23-201 | snoRNA | GM23338 (Cell line) |
| ENST00000364543.1 | ENST00000364543.1_1_39_+ | 1–39 | 4.00 | 0.00 | 0.03 | 100.0 | RNA5SP141-201 | rRNA pseudogene | GM23338 (Cell line) |
| ENST00000364722.1 | ENST00000364722.1_2_30_+ | 2–30 | 1280.00 | 76.92 | 9.90 | 100.0 | ENST00000364722 | snoRNA | GM23338 (Cell line) |
| ENST00000364809.1 | ENST00000364809.1_2_81_+ | 2–81 | 4.00 | 57.14 | 0.03 | 100.0 | SNORD115-15-201 | snoRNA | GM23338 (Cell line) |
| ENST00000364884.1 | ENST00000364884.1_1_66_+ | 1–66 | 77.00 | 11.63 | 0.60 | 100.0 | SNORD52-201 | snoRNA | GM23338 (Cell line) |
| ENST00000364915.1 | ENST00000364915.1_1_76_+ | 1–76 | 39.00 | 18.75 | 0.30 | 63.93 | SNORD117-201 | snoRNA | GM23338 (Cell line) |
| ENST00000364915.1 | ENST00000364915.1_2_74_+ | 2–74 | 23.00 | 11.06 | 0.18 | 37.1 | SNORD117-201 | snoRNA | GM23338 (Cell line) |
| ENST00000364969.1 | ENST00000364969.1_3_71_+ | 3–71 | 1.00 | 16.67 | 0.01 | 100.0 | SNORD114-3-201 | snoRNA | GM23338 (Cell line) |
| ENST00000364969.1 | ENST00000364969.1_4_62_+ | 4–62 | 3.00 | 50.00 | 0.02 | 100.0 | SNORD114-3-201 | snoRNA | GM23338 (Cell line) |
| ENST00000364969.1 | ENST00000364969.1_38_71_+ | 38–71 | 1.00 | 16.67 | 0.01 | 100.0 | SNORD114-3-201 | snoRNA | GM23338 (Cell line) |
| ENST00000364991.1 | ENST00000364991.1_17_30_+ | 17–30 | 9468.00 | 34.12 | 73.21 | 100.0 | RNA5SP298-201 | rRNA pseudogene | GM23338 (Cell line) |
| ENST00000365161.1 | ENST00000365161.1_1_38_+ | 1–38 | 650.00 | 24.96 | 5.03 | 100.0 | SNORD38A-201 | snoRNA | GM23338 (Cell line) |
| ENST00000365161.1 | ENST00000365161.1_1_41_+ | 1–41 | 45.00 | 1.73 | 0.35 | 100.0 | SNORD38A-201 | snoRNA | GM23338 (Cell line) |
| ENST00000365161.1 | ENST00000365161.1_1_68_+ | 1–68 | 1556.00 | 59.75 | 12.03 | 100.0 | SNORD38A-201 | snoRNA | GM23338 (Cell line) |
| ENST00000365328.1 | ENST00000365328.1_260_331_+ | 260–331 | 75.00 | 0.69 | 0.58 | 100.0 | 7SK.1-201 | misc RNA | GM23338 (Cell line) |
| ENST00000365328.1 | ENST00000365328.1_270_331_+ | 270–331 | 93.00 | 0.85 | 0.72 | 31.0 | 7SK.1-201 | misc RNA | GM23338 (Cell line) |
| ENST00000365328.1 | ENST00000365328.1_1_76_+ | 1–76 | 100.00 | 0.92 | 0.77 | 100.0 | 7SK.1-201 | misc RNA | GM23338 (Cell line) |
| ENST00000365328.1 | ENST00000365328.1_238_331_+ | 238–331 | 31.00 | 0.28 | 0.24 | 100.0 | 7SK.1-201 | misc RNA | GM23338 (Cell line) |
| ENST00000365328.1 | ENST00000365328.1_273_331_+ | 273–331 | 767.00 | 7.03 | 5.93 | 62.66 | 7SK.1-201 | misc RNA | GM23338 (Cell line) |
| ENST00000365328.1 | ENST00000365328.1_1_63_+ | 1–63 | 618.00 | 5.67 | 4.78 | 30.15 | 7SK.1-201 | misc RNA | GM23338 (Cell line) |
| ENST00000365328.1 | ENST00000365328.1_282_331_+ | 282–331 | 34.00 | 0.31 | 0.26 | 100.0 | 7SK.1-201 | misc RNA | GM23338 (Cell line) |
| ENST00000365328.1 | ENST00000365328.1_246_331_+ | 246–331 | 532.00 | 4.88 | 4.11 | 100.0 | 7SK.1-201 | misc RNA | GM23338 (Cell line) |
| ENST00000365328.1 | ENST00000365328.1_277_331_+ | 277–331 | 917.00 | 8.41 | 7.09 | 66.74 | 7SK.1-201 | misc RNA | GM23338 (Cell line) |
| ENST00000365382.1 | ENST00000365382.1_1_88_+ | 1–88 | 38.00 | 40.86 | 0.29 | 100.0 | SNORD14C-201 | snoRNA | GM23338 (Cell line) |
| ENST00000365391.1 | ENST00000365391.1_2_82_+ | 2–82 | 2.00 | 50.00 | 0.02 | 100.0 | SNORD115-44-201 | snoRNA | GM23338 (Cell line) |