ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 78.00 1.25 0.60 22.94 RNU5B-1-201 snRNA GM23338 (Cell line)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 4.00 80.00 0.03 100.0 SNORD115-18-201 snoRNA GM23338 (Cell line)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 630.00 10.52 4.87 63.19 RNY4P27-201 misc RNA GM23338 (Cell line)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 3826.00 63.87 29.58 91.25 RNY4P27-201 misc RNA GM23338 (Cell line)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 291.00 28.03 2.25 100.0 Y_RNA.136-201 misc RNA GM23338 (Cell line)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 1.00 25.00 0.01 100.0 SNORD115-33-201 snoRNA GM23338 (Cell line)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 1.00 33.33 0.01 100.0 SNORD115-8-201 snoRNA GM23338 (Cell line)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 200.00 36.63 1.55 100.0 Y_RNA.181-201 misc RNA GM23338 (Cell line)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 1.00 25.00 0.01 100.0 SNORD115-16-201 snoRNA GM23338 (Cell line)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 5.00 83.33 0.04 100.0 SNORD115-32-201 snoRNA GM23338 (Cell line)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 1.00 33.33 0.01 100.0 SNORD115-30-201 snoRNA GM23338 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 599.72 9.55 4.64 62.93 RNY1-201 misc RNA GM23338 (Cell line)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 2.00 0.03 0.02 100.0 RNY1-201 misc RNA GM23338 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 226.33 3.60 1.75 36.27 RNY1-201 misc RNA GM23338 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 41.00 0.65 0.32 100.0 RNY1-201 misc RNA GM23338 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 297.00 4.73 2.30 100.0 RNY1-201 misc RNA GM23338 (Cell line)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 104.00 0.26 0.80 100.0 RNA5SP202-201 rRNA pseudogene GM23338 (Cell line)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 8.59 0.02 0.07 31.83 RNA5SP202-201 rRNA pseudogene GM23338 (Cell line)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 3.00 0.01 0.02 100.0 RNA5SP202-201 rRNA pseudogene GM23338 (Cell line)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 14.40 0.04 0.11 55.37 RNA5SP202-201 rRNA pseudogene GM23338 (Cell line)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 6.00 0.01 0.05 100.0 RNA5SP202-201 rRNA pseudogene GM23338 (Cell line)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1.00 0.00 0.01 100.0 RNA5SP202-201 rRNA pseudogene GM23338 (Cell line)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 2944.00 7.34 22.76 100.0 RNA5SP202-201 rRNA pseudogene GM23338 (Cell line)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 2807.98 7.00 21.71 18.18 RNA5SP202-201 rRNA pseudogene GM23338 (Cell line)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 638.00 28.78 4.93 100.0 Y_RNA.234-201 misc RNA GM23338 (Cell line)