ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 342.00 1.16 2.64 87.92 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 54.00 0.18 0.42 100.0 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 115.00 0.39 0.89 59.59 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 271.00 0.92 2.10 51.13 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 19377.00 65.56 149.83 100.0 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 79.21 0.27 0.61 39.81 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 282.00 0.95 2.18 76.63 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 106.00 0.36 0.82 43.62 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 231.00 0.78 1.79 100.0 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 592.00 2.00 4.58 89.97 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 239.00 0.81 1.85 65.48 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 53.73 0.18 0.42 19.9 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 97.00 0.33 0.75 59.51 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 189.93 0.64 1.47 76.28 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 178.94 0.61 1.38 35.65 RNU5A-1-201 snRNA GM23338 (Cell line)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 3.00 0.97 0.02 100.0 SNORD104-201 snoRNA GM23338 (Cell line)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 1472.00 7.35 11.38 73.97 RNA5SP358-201 rRNA pseudogene GM23338 (Cell line)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 79391.00 39.64 613.88 89.34 RNA5SP145-201 rRNA pseudogene GM23338 (Cell line)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 122.00 16.42 0.94 100.0 Y_RNA.105-201 misc RNA GM23338 (Cell line)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 29.00 14.95 0.22 100.0 RNY4P9-201 misc RNA GM23338 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 78.00 1.25 0.60 22.94 RNU5B-1-201 snRNA GM23338 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 119.00 1.91 0.92 100.0 RNU5B-1-201 snRNA GM23338 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 180.00 2.89 1.39 100.0 RNU5B-1-201 snRNA GM23338 (Cell line)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 54.00 0.87 0.42 100.0 RNU5B-1-201 snRNA GM23338 (Cell line)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 64.00 1.03 0.49 100.0 RNU5B-1-201 snRNA GM23338 (Cell line)