ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 3899.00 26.71 30.15 100.0 SNHG14-315 lncRNA GM23338 (Cell line)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 4255.00 29.15 32.90 98.72 SNHG14-315 lncRNA GM23338 (Cell line)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 3318.00 22.73 25.66 97.13 SNHG14-315 lncRNA GM23338 (Cell line)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 600.00 0.98 4.64 100.0 SNHG5-273 lncRNA GM23338 (Cell line)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 4282.79 7.01 33.12 16.43 SNHG5-273 lncRNA GM23338 (Cell line)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 608.00 0.99 4.70 100.0 SNHG5-273 lncRNA GM23338 (Cell line)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 1006.00 1.65 7.78 100.0 SNHG5-273 lncRNA GM23338 (Cell line)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 28562.00 46.73 220.85 87.67 SNHG5-273 lncRNA GM23338 (Cell line)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 2078.00 3.40 16.07 44.34 SNHG5-273 lncRNA GM23338 (Cell line)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 116.00 0.19 0.90 100.0 SNHG5-273 lncRNA GM23338 (Cell line)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 11029.00 18.04 85.28 100.0 SNHG5-273 lncRNA GM23338 (Cell line)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 51.00 0.08 0.39 100.0 SNHG5-273 lncRNA GM23338 (Cell line)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 1629.00 2.67 12.60 91.41 SNHG5-273 lncRNA GM23338 (Cell line)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 57.00 1.93 0.44 81.43 SNHG14-323 lncRNA GM23338 (Cell line)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 1.00 25.00 0.01 100.0 MEG8-251 lncRNA GM23338 (Cell line)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 990.00 39.22 7.66 84.54 SNHG14-336 lncRNA GM23338 (Cell line)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 929.00 36.81 7.18 52.4 SNHG14-336 lncRNA GM23338 (Cell line)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 2540.00 71.25 19.64 98.99 SNHG14-341 lncRNA GM23338 (Cell line)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 2.00 0.13 0.02 100.0 NCL-211 retained intron GM23338 (Cell line)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 2617.00 73.04 20.24 100.0 FMN2-209 protein coding CDS not defined GM23338 (Cell line)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 933.00 2.95 7.21 72.16 LINC02739-203 lncRNA GM23338 (Cell line)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 27.00 0.09 0.21 100.0 LINC02739-203 lncRNA GM23338 (Cell line)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 360.00 1.14 2.78 27.84 LINC02739-203 lncRNA GM23338 (Cell line)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 1719.00 5.43 13.29 100.0 LINC02739-203 lncRNA GM23338 (Cell line)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 7205.00 22.75 55.71 100.0 LINC02739-203 lncRNA GM23338 (Cell line)