ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 12784.00 4.36 98.85 99.79 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 6410.00 2.18 49.56 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 21520.00 7.33 166.40 98.82 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 32.00 0.01 0.25 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 138.00 0.05 1.07 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1458.00 0.50 11.27 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 282.00 0.10 2.18 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 26.00 0.01 0.20 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 8.00 0.00 0.06 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 16557.00 5.64 128.03 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 698.00 0.24 5.40 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 460.00 0.16 3.56 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 40888.00 13.93 316.16 99.31 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 9.00 0.00 0.07 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 4310.00 1.47 33.33 91.57 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 25.00 0.01 0.19 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 12.00 0.00 0.09 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 3984.00 1.36 30.81 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 784.00 0.27 6.06 81.58 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 6.19 0.00 0.05 30.93 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 236.00 0.08 1.82 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 415.00 0.14 3.21 62.88 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 48.00 0.02 0.37 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 59.00 0.02 0.46 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 100.00 0.03 0.77 100.0 SNHG1-248 lncRNA GM23338 (Cell line)