ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 152.00 0.20 1.18 100.0 LIMD1-AS1-204 lncRNA GM23338 (Cell line)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 14213.00 18.30 109.90 89.97 LIMD1-AS1-204 lncRNA GM23338 (Cell line)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 6.00 50.00 0.05 100.0 MIR99AHG-262 lncRNA GM23338 (Cell line)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 5.00 41.67 0.04 100.0 MIR99AHG-262 lncRNA GM23338 (Cell line)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 124.00 30.77 0.96 100.0 SNHG14-270 lncRNA GM23338 (Cell line)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 1.00 0.02 0.01 100.0 SNHG14-275 lncRNA GM23338 (Cell line)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 3.00 0.49 0.02 100.0 MIR9-2HG-225 lncRNA GM23338 (Cell line)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 567.00 92.20 4.38 98.1 MIR9-2HG-225 lncRNA GM23338 (Cell line)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 9.00 0.41 0.07 100.0 SNHG14-278 lncRNA GM23338 (Cell line)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 51.00 2.34 0.39 100.0 SNHG14-278 lncRNA GM23338 (Cell line)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 432.00 65.85 3.34 100.0 SNHG17-252 lncRNA GM23338 (Cell line)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 156.00 0.55 1.21 13.36 SNHG14-288 lncRNA GM23338 (Cell line)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 25047.00 87.63 193.67 99.54 SNHG14-288 lncRNA GM23338 (Cell line)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 856.00 2.44 6.62 100.0 ENST00000666735 lncRNA GM23338 (Cell line)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 192.00 0.55 1.48 100.0 ENST00000666735 lncRNA GM23338 (Cell line)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 65.99 4.50 0.51 19.88 SNHG14-312 lncRNA GM23338 (Cell line)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 279.66 19.05 2.16 84.23 SNHG14-312 lncRNA GM23338 (Cell line)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 9.00 0.61 0.07 100.0 SNHG14-312 lncRNA GM23338 (Cell line)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 3.00 75.00 0.02 100.0 MEG8-244 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 278.00 0.09 2.15 100.0 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 15061.00 5.13 116.46 47.75 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 13.71 0.00 0.11 68.55 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 459.00 0.16 3.55 78.33 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 98845.00 33.68 764.31 94.81 SNHG1-248 lncRNA GM23338 (Cell line)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 39.00 0.01 0.30 28.47 SNHG1-248 lncRNA GM23338 (Cell line)