ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 205827.00 17.91 1591.53 84.68 ENST00000565336 lncRNA GM23338 (Cell line)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 1052.00 9.07 8.13 100.0 RBMX-210 retained intron GM23338 (Cell line)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 62.00 0.53 0.48 100.0 RBMX-210 retained intron GM23338 (Cell line)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 993.00 8.56 7.68 100.0 RBMX-210 retained intron GM23338 (Cell line)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 8017.00 69.09 61.99 99.75 RBMX-210 retained intron GM23338 (Cell line)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 696.00 29.85 5.38 100.0 RPL4-214 retained intron GM23338 (Cell line)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 17.00 0.73 0.13 100.0 RPL4-214 retained intron GM23338 (Cell line)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 31731.02 25.41 245.36 40.25 POLG-DT-202 lncRNA GM23338 (Cell line)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 57830.02 46.32 447.16 71.5 POLG-DT-202 lncRNA GM23338 (Cell line)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 1725.00 1.38 13.34 100.0 POLG-DT-202 lncRNA GM23338 (Cell line)
ENST00000570843.1 ENST00000570843.1_1_85_+ 1–85 12.00 0.13 0.09 100.0 ENST00000570843 lncRNA GM23338 (Cell line)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 2124.00 22.51 16.42 100.0 ENST00000570843 lncRNA GM23338 (Cell line)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 48.00 51.61 0.37 100.0 MIR497HG-207 lncRNA GM23338 (Cell line)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 5783.00 99.59 44.72 99.84 MIR22HG-212 lncRNA GM23338 (Cell line)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 515.00 21.91 3.98 89.72 SNORD53B-201 snoRNA GM23338 (Cell line)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 59.00 2.51 0.46 10.28 SNORD53B-201 snoRNA GM23338 (Cell line)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 852.00 36.26 6.59 53.05 SNORD53B-201 snoRNA GM23338 (Cell line)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 546.00 74.49 4.22 100.0 ENST00000578036 lncRNA GM23338 (Cell line)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 779.00 63.96 6.02 100.0 RPL23A-207 protein coding GM23338 (Cell line)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 341.00 94.99 2.64 100.0 MIR744-201 miRNA GM23338 (Cell line)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 78.00 78.00 0.60 100.0 MIR378C-201 miRNA GM23338 (Cell line)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 2.00 1.43 0.02 100.0 MIR142HG-201 lncRNA GM23338 (Cell line)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 7.00 5.00 0.05 7.07 MIR142HG-201 lncRNA GM23338 (Cell line)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 5.00 3.57 0.04 5.26 MIR142HG-201 lncRNA GM23338 (Cell line)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 587.00 2.71 4.54 100.0 SNORD3C-201 snoRNA GM23338 (Cell line)