ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 237.00 1.65 1.83 100.0 TAF1D-215 retained intron GM23338 (Cell line)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 12590.00 87.72 97.35 100.0 TAF1D-215 retained intron GM23338 (Cell line)
ENST00000531908.5 ENST00000531908.5_147_241_+ 147–241 5.00 0.45 0.04 100.0 RPS13-208 retained intron GM23338 (Cell line)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 204.00 22.17 1.58 100.0 HSPA8-215 retained intron GM23338 (Cell line)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 1.00 0.11 0.01 100.0 HSPA8-215 retained intron GM23338 (Cell line)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 1.00 0.11 0.01 100.0 HSPA8-215 retained intron GM23338 (Cell line)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 211.00 20.47 1.63 100.0 RPS2-215 retained intron GM23338 (Cell line)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 3.00 25.00 0.02 100.0 ENST00000548801 lncRNA GM23338 (Cell line)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 7.00 0.64 0.05 100.0 ENST00000554988 lncRNA GM23338 (Cell line)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 34.00 3.12 0.26 100.0 ENST00000554988 lncRNA GM23338 (Cell line)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 252.00 23.10 1.95 100.0 ENST00000554988 lncRNA GM23338 (Cell line)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 1882.00 8.38 14.55 100.0 SNHG14-220 retained intron GM23338 (Cell line)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 752.00 3.35 5.81 100.0 SNHG14-220 retained intron GM23338 (Cell line)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 177.00 0.79 1.37 100.0 SNHG14-220 retained intron GM23338 (Cell line)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 16100.00 71.71 124.49 100.0 SNHG14-220 retained intron GM23338 (Cell line)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 8151.00 99.68 63.03 100.0 TEKT4P2-201 transcribed unprocessed pseudogene GM23338 (Cell line)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 4.00 0.07 0.03 100.0 RPL4-202 retained intron GM23338 (Cell line)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 505.00 8.78 3.90 100.0 RPL4-202 retained intron GM23338 (Cell line)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 8.00 0.14 0.06 100.0 RPL4-202 retained intron GM23338 (Cell line)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 606.00 10.54 4.69 100.0 RPL4-202 retained intron GM23338 (Cell line)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 3530.00 61.40 27.30 97.3 RPL4-202 retained intron GM23338 (Cell line)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 95.00 0.01 0.73 100.0 ENST00000563103 lncRNA GM23338 (Cell line)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 2972.00 26.59 22.98 100.0 RPL4-207 retained intron GM23338 (Cell line)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 3708.00 33.18 28.67 100.0 RPL4-207 retained intron GM23338 (Cell line)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 836459.00 72.77 6467.83 94.01 ENST00000565336 lncRNA GM23338 (Cell line)