ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 2211.00 6.04 17.10 100.0 RNY4-201 misc RNA GM23338 (Cell line)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 454.00 1.24 3.51 100.0 RNY4-201 misc RNA GM23338 (Cell line)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 68.00 0.19 0.53 100.0 RNY4-201 misc RNA GM23338 (Cell line)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 60.00 0.16 0.46 100.0 RNY4-201 misc RNA GM23338 (Cell line)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 7474.00 20.43 57.79 91.75 RNY4-201 misc RNA GM23338 (Cell line)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 1639.00 4.48 12.67 70.92 RNY4-201 misc RNA GM23338 (Cell line)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 5.00 0.01 0.04 100.0 RNY4-201 misc RNA GM23338 (Cell line)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 762.00 2.08 5.89 64.63 RNY4-201 misc RNA GM23338 (Cell line)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 93.00 0.25 0.72 100.0 RNY4-201 misc RNA GM23338 (Cell line)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 10512.00 28.73 81.28 96.49 RNY4-201 misc RNA GM23338 (Cell line)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 140.00 92.11 1.08 97.9 MIR3142HG-201 lncRNA GM23338 (Cell line)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 162.00 34.76 1.25 100.0 SNHG6-204 retained intron GM23338 (Cell line)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 3146.00 13.17 24.33 100.0 MIR151A-201 miRNA GM23338 (Cell line)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 18098.00 75.75 139.94 89.14 MIR151A-201 miRNA GM23338 (Cell line)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 6301.00 98.92 48.72 100.0 DENND3-221 protein coding GM23338 (Cell line)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 176.00 0.01 1.36 100.0 WDR74-204 protein coding GM23338 (Cell line)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 3655.00 0.19 28.26 90.94 WDR74-204 protein coding GM23338 (Cell line)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 21.00 0.00 0.16 100.0 WDR74-204 protein coding GM23338 (Cell line)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 47.00 0.00 0.36 100.0 WDR74-204 protein coding GM23338 (Cell line)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 354.00 0.02 2.74 57.19 WDR74-204 protein coding GM23338 (Cell line)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 1226.00 0.06 9.48 70.46 WDR74-204 protein coding GM23338 (Cell line)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 265.00 0.01 2.05 42.81 WDR74-204 protein coding GM23338 (Cell line)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 100.00 0.01 0.77 100.0 WDR74-204 protein coding GM23338 (Cell line)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 1191.00 59.40 9.21 100.0 HSPA8-211 retained intron GM23338 (Cell line)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 33.00 1.82 0.26 100.0 SCARNA9-201 lncRNA GM23338 (Cell line)