ENCFF450POH

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 2265.00 83.89 17.51 91.0 MIR194-2HG-201 lncRNA GM23338 (Cell line)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 2661.00 9.47 20.58 100.0 LINC01783-201 lncRNA GM23338 (Cell line)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 817.00 97.96 6.32 100.0 RPS7P15-201 processed pseudogene GM23338 (Cell line)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 9.00 0.59 0.07 100.0 SNORD62B-201 snoRNA GM23338 (Cell line)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1162.00 75.60 8.99 91.42 SNORD62B-201 snoRNA GM23338 (Cell line)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 15.00 0.98 0.12 100.0 SNORD62B-201 snoRNA GM23338 (Cell line)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 8.00 0.52 0.06 100.0 SNORD62B-201 snoRNA GM23338 (Cell line)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 2.00 0.13 0.02 100.0 SNORD62B-201 snoRNA GM23338 (Cell line)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 2121.00 98.51 16.40 100.0 MRPL32-203 nonsense mediated decay GM23338 (Cell line)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 147.00 52.13 1.14 100.0 ENST00000436739 lncRNA GM23338 (Cell line)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 3.00 0.06 0.02 15.0 TMEM107-204 protein coding GM23338 (Cell line)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 275.00 5.73 2.13 100.0 TMEM107-204 protein coding GM23338 (Cell line)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 123.00 2.56 0.95 33.98 TMEM107-204 protein coding GM23338 (Cell line)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 83.00 1.73 0.64 100.0 TMEM107-204 protein coding GM23338 (Cell line)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 201.00 11.71 1.55 61.66 SNHG16-201 lncRNA GM23338 (Cell line)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 396.00 23.06 3.06 100.0 SNHG16-201 lncRNA GM23338 (Cell line)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 7248.00 97.16 56.04 99.12 SNORD105B-201 snoRNA GM23338 (Cell line)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 276.00 69.17 2.13 98.22 SNORD121B-201 snoRNA GM23338 (Cell line)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 5154.00 54.42 39.85 100.0 SNORD127-201 snoRNA GM23338 (Cell line)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 1185.00 12.51 9.16 99.5 SNORD127-201 snoRNA GM23338 (Cell line)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 964.00 80.94 7.45 100.0 SNORD42B-201 snoRNA GM23338 (Cell line)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 313.00 21.53 2.42 100.0 RNY4P25-201 misc RNA GM23338 (Cell line)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 22.00 32.35 0.17 100.0 SNORD121A-201 snoRNA GM23338 (Cell line)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 1938.00 49.51 14.99 86.1 SNORD126-201 snoRNA GM23338 (Cell line)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 657.00 16.79 5.08 66.63 SNORD126-201 snoRNA GM23338 (Cell line)