ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 2061.00 36.78 10.25 85.13 MIR23B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 3126.00 55.78 15.54 85.22 MIR23B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 25150.00 87.04 125.05 100.0 MIR203A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 2525.00 76.12 12.55 89.54 MIR199B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 398.00 12.00 1.98 100.0 MIR199B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 607.00 89.79 3.02 100.0 MIR30B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 331.00 97.64 1.65 100.0 MIR181D-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 5.00 71.43 0.02 100.0 MIR215-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 179.00 0.53 0.89 100.0 MIR181A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 49176.00 98.41 244.51 99.43 MIR191-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 47.00 39.17 0.23 46.08 MIR149-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 18.00 2.91 0.09 100.0 MIR181C-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 581.00 94.01 2.89 99.15 MIR181C-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 25.00 86.21 0.12 100.0 MIR194-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 278.00 84.24 1.38 86.6 MIR128-2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1745.00 78.53 8.68 87.87 MIR99A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 526.00 0.98 2.62 100.0 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 48931.00 91.50 243.30 95.25 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 936.00 1.75 4.65 83.35 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 1393.00 78.04 6.93 100.0 MIR183-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 979.00 22.76 4.87 100.0 MIR145-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 1783.00 41.46 8.87 100.0 MIR145-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 6267.00 96.39 31.16 97.95 MIR186-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 7430.00 90.09 36.94 100.0 MIR200B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 16.00 40.00 0.08 100.0 MIR218-1-201 miRNA esophagus squamous epithelium (Tissue)