ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 236.00 1.26 1.17 100.0 SNORD38A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 16242.00 86.51 80.76 100.0 SNORD38A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1508.00 8.03 7.50 100.0 SNORD38A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 1184.00 87.70 5.89 95.56 SNORD114-20-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 3.00 0.26 0.01 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 27.00 2.34 0.13 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 126.00 10.93 0.63 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 55.00 4.77 0.27 59.14 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 151.00 13.10 0.75 75.88 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 63.00 5.46 0.31 56.76 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 27.00 2.34 0.13 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 5.00 0.43 0.02 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 3.00 0.26 0.01 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 303.00 64.33 1.51 100.0 SNORD14C-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 21.00 63.64 0.10 100.0 SNORD115-44-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 317.00 38.90 1.58 100.0 RNA5SP77-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 1037.00 22.67 5.16 95.4 SNORD114-22-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 3367.00 73.60 16.74 100.0 SNORD114-22-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 20224.00 89.98 100.56 100.0 SNORD6-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 662.00 2.95 3.29 100.0 SNORD6-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 214.00 5.36 1.06 100.0 RNY3-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6252.91 24.93 31.09 58.16 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1061.00 4.23 5.28 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 85.00 0.34 0.42 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 4946.00 19.72 24.59 98.94 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)