ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 3546.00 2.48 17.63 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 1575.59 1.10 7.83 33.91 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 442.00 0.31 2.20 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 1709.00 1.20 8.50 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 7237.24 5.07 35.99 43.24 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 629.00 0.44 3.13 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 820.00 78.92 4.08 100.0 SNORD114-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 135.00 12.99 0.67 100.0 SNORD114-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 502.00 1.60 2.50 100.0 Y_RNA.234-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 7921.00 6.20 39.38 100.0 RNA5S9-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 189.00 2.46 0.94 100.0 RNA5SP141-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 164.00 80.00 0.82 100.0 SNORD114-15-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 305.00 65.17 1.52 100.0 ENST00000364722 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 3.00 17.65 0.01 100.0 SNORD115-15-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 278.00 61.23 1.38 100.0 SNORD113-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 9356.00 84.78 46.52 100.0 SNORD52-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 300.00 17.40 1.49 29.04 SNORD117-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 953.00 55.28 4.74 76.06 SNORD117-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 113.00 20.70 0.56 100.0 SNORD114-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 339.00 62.09 1.69 85.61 SNORD114-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 208.00 5.37 1.03 100.0 RNA5SP298-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 4.00 28.57 0.02 100.0 SNORD115-38-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 16.00 55.17 0.08 100.0 SNORD115-10-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 417.00 85.45 2.07 100.0 SNORD113-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 3.00 42.86 0.01 100.0 SNORD115-20-201 snoRNA esophagus squamous epithelium (Tissue)