ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1570.00 11.70 7.81 98.56 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 139.00 1.04 0.69 15.72 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 318.00 2.37 1.58 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 962.00 11.62 4.78 53.68 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 1051.00 12.69 5.23 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 587.00 7.63 2.92 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 194.00 1.37 0.96 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 46.00 0.32 0.23 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 975.00 6.88 4.85 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 7725.00 54.50 38.41 97.22 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 730.00 5.15 3.63 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 567.00 8.83 2.82 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 2931.00 27.75 14.57 69.03 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 136.00 2.48 0.68 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 95.00 1.90 0.47 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 69.00 1.38 0.34 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 38.00 0.76 0.19 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 1827.00 36.61 9.08 88.86 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 1183.00 0.55 5.88 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 205.00 16.79 1.02 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 1.00 0.26 0.00 16.67 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 5.00 1.29 0.02 83.33 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 631.00 9.83 3.14 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 7.00 0.11 0.03 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 375.00 48.58 1.86 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA esophagus squamous epithelium (Tissue)