ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 111.00 0.05 0.55 77.62 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 180.00 0.08 0.89 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 200.00 0.09 0.99 81.3 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 28466.00 13.10 141.54 39.31 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 3.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 22.00 0.01 0.11 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 209.00 62.57 1.04 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 1263.00 0.73 6.28 98.29 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 53.00 4.21 0.26 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 194.00 15.42 0.96 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 113.00 6.51 0.56 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 3.00 0.05 0.01 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 3522.00 2.04 17.51 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 536.00 0.31 2.67 45.35 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 283.00 7.58 1.41 62.2 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 244.00 6.54 1.21 46.3 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 79.00 0.89 0.39 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 131631.00 60.69 654.50 85.25 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 4339.00 2.00 21.57 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 174.00 16.02 0.87 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 9.00 0.46 0.04 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 27.00 0.09 0.13 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 31.00 0.23 0.15 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 91.00 0.68 0.45 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 326.00 2.43 1.62 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)