ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 6.00 1.05 0.03 100.0 TAF12-DT-204 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 165947.00 96.52 825.12 99.82 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 54.00 0.03 0.27 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 59.00 0.03 0.29 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2346.00 1.36 11.66 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 2638.00 15.02 13.12 100.0 ZFAS1-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 13886.00 79.05 69.04 100.0 ZFAS1-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 515.00 28.34 2.56 100.0 ENST00000837997 lncRNA esophagus squamous epithelium (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 685.00 37.70 3.41 100.0 ENST00000837997 lncRNA esophagus squamous epithelium (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 2547.00 56.20 12.66 62.84 ENST00000839036 lncRNA esophagus squamous epithelium (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 301.00 16.24 1.50 100.0 ENST00000849527 lncRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 7025.00 49.57 34.93 96.67 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 206.00 1.45 1.02 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 98.00 0.09 0.49 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1932.00 54.92 9.61 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 101.00 2.87 0.50 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 44.00 4.36 0.22 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 120.00 1.67 0.60 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 458.00 29.47 2.28 65.52 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 921.00 0.87 4.58 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 4.00 14.29 0.02 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 1060.00 3.83 5.27 88.33 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 22263.00 80.38 110.70 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 5914.00 55.85 29.41 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 429.00 0.20 2.13 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)