ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 1273.00 13.66 6.33 89.77 MIR126-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 7654.00 82.14 38.06 100.0 MIR126-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 26.00 25.00 0.13 100.0 MIR374A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 3079.00 81.00 15.31 100.0 MIR31-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 4267.00 0.53 21.22 84.83 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 258.00 0.03 1.28 77.95 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 288.00 0.04 1.43 46.08 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 213.00 0.03 1.06 100.0 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 1461.00 0.18 7.26 72.15 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 80.00 0.01 0.40 100.0 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 1473.60 0.18 7.33 58.45 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 2519.00 0.31 12.53 76.87 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 1452.00 0.18 7.22 51.43 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 920.00 0.11 4.57 63.06 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 60.00 0.01 0.30 100.0 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 203.00 0.03 1.01 68.35 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 699.74 0.09 3.48 62.81 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 1390.75 0.17 6.92 46.73 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 724.00 0.09 3.60 44.61 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 929.00 0.12 4.62 68.51 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 717.37 0.09 3.57 40.26 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 631483.00 78.70 3139.87 99.88 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 2671.00 0.33 13.28 74.82 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 115.00 11.78 0.57 100.0 Y_RNA.14-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 7.00 35.00 0.03 100.0 SNORD115-34-201 snoRNA esophagus squamous epithelium (Tissue)