ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 319.00 14.50 1.59 55.67 MT-TF-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 721.00 26.95 3.58 100.0 MT-TV-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 330.00 1.97 1.64 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 3426.00 20.41 17.03 90.21 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 132.00 0.79 0.66 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 2453.00 14.62 12.20 86.95 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 137.00 0.82 0.68 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 188.00 1.12 0.93 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 2.00 0.01 0.01 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 874.00 34.81 4.35 100.0 MT-TI-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 457.00 18.20 2.27 90.32 MT-TI-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 18.00 0.12 0.09 100.0 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 5076.00 33.60 25.24 90.87 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 2297.25 15.20 11.42 63.85 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 2398.78 15.88 11.93 48.23 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 1820.00 40.32 9.05 81.43 MT-TM-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 592.00 13.11 2.94 100.0 MT-TM-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 354.00 27.66 1.76 100.0 MT-TC-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 912.00 1.85 4.53 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 19152.00 38.93 95.23 84.61 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 67.00 0.14 0.33 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 5047.00 10.26 25.09 87.45 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 34.00 0.07 0.17 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 18355.00 37.31 91.27 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 99.00 23.57 0.49 100.0 MT-TD-201 Mt tRNA esophagus squamous epithelium (Tissue)