ENCFF429ILE

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR379GPS
Description: Part of ENCODE experiment ENCSR379GPS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 3349.00 91.55 16.65 95.49 MIR181B2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 240064.00 89.28 1193.65 89.9 MIR10B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 102.93 41.50 0.51 62.01 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 107.33 43.28 0.53 50.63 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 25.00 10.08 0.12 100.0 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 2641.00 46.83 13.13 100.0 MIR199A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 2.00 66.67 0.01 100.0 MIR487B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 530.12 44.62 2.64 46.3 MIR93-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 570.69 48.04 2.84 55.51 MIR93-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 284.00 83.28 1.41 91.61 MIR532-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 82.00 80.39 0.41 100.0 MIR15B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 204.00 73.65 1.01 100.0 MIR150-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 1.00 100.00 0.00 100.0 MIR542-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 359.00 74.17 1.79 100.0 MIR500A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 28.00 5.79 0.14 100.0 MIR500A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 8097.00 41.31 40.26 93.7 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 9890.00 50.46 49.18 94.79 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 720.00 3.67 3.58 100.0 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 130.00 0.66 0.65 100.0 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 129911.00 92.93 645.95 95.37 MIR27B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1350.00 0.97 6.71 100.0 MIR27B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 4.00 80.00 0.02 100.0 MIR196A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 30.00 65.22 0.15 100.0 MIR577-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 17.00 65.38 0.08 89.47 MIR654-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 21.00 91.30 0.10 100.0 MIR204-201 miRNA esophagus squamous epithelium (Tissue)