ENCFF000JJB

Library Details

Organism: Homo Sapiens
Biosample: hair follicle dermal papilla cell (Primary cell)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000CVC
Description: Part of ENCODE experiment ENCSR000CVC. The libraries contained in this experiment come from hair follicle dermal papilla primary whole cells, HFDPC isolated from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_1_88_+ 1–88 1078.00 65.45 57.27 100.0 ENST00000651540 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000654356.2 ENST00000654356.2_1362_1446_+ 1362–1446 52031.00 10.62 2764.33 99.47 SNHG29-232 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000654356.2 ENST00000654356.2_1361_1440_+ 1361–1440 407117.00 83.09 21629.53 95.61 SNHG29-232 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000654356.2 ENST00000654356.2_1361_1451_+ 1361–1451 1391.00 0.28 73.90 100.0 SNHG29-232 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000654356.2 ENST00000654356.2_463_540_+ 463–540 704.00 0.14 37.40 100.0 SNHG29-232 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 1935.00 16.27 102.80 100.0 SNHG1-248 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668048.2 ENST00000668048.2_517_601_+ 517–601 2428.00 20.41 129.00 100.0 SNHG1-248 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 3757.00 31.59 199.60 100.0 SNHG1-248 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668505.1 ENST00000668505.1_982_1066_+ 982–1066 2151.00 3.14 114.28 100.0 SNHG5-273 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668505.1 ENST00000668505.1_1272_1356_+ 1272–1356 24833.00 36.24 1319.34 82.22 SNHG5-273 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 26618.00 38.85 1414.18 87.2 SNHG5-273 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000670697.1 ENST00000670697.1_226_313_+ 226–313 1045.00 83.87 55.52 100.0 SNHG14-336 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000677786.1 ENST00000677786.1_3513_3605_+ 3513–3605 813.00 55.57 43.19 100.0 NCL-216 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 10070.51 50.56 535.03 67.71 SNHG19-202 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 4829.33 24.25 256.58 35.69 SNHG19-202 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000693179.2 ENST00000693179.2_532_619_+ 532–619 515.00 43.87 27.36 100.0 SNHG8-214 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000722183.1 ENST00000722183.1_108_192_+ 108–192 7163.00 78.55 380.56 100.0 ENST00000722183 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000747512.1 ENST00000747512.1_63_156_+ 63–156 10013.00 84.44 531.98 100.0 ENST00000747512 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 10729.00 91.21 570.02 100.0 ENST00000772672 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 2.00 0.42 0.11 100.0 ENST00000788343 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 7.00 0.08 0.37 100.0 ENST00000823279 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 165.00 1.99 8.77 9.09 ENST00000823279 lncRNA hair follicle dermal papilla cell (Primary cell)