ENCFF400GBK

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR587CPE
Description: Part of ENCODE experiment ENCSR587CPE. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 5111.00 58.84 25.21 93.61 MIR30D-201 miRNA spleen (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 4006.00 24.29 19.76 90.47 MIR126-201 miRNA spleen (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 11579.00 70.21 57.12 100.0 MIR126-201 miRNA spleen (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 70.00 50.72 0.35 100.0 MIR374A-201 miRNA spleen (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 5.00 83.33 0.02 100.0 MIR31-201 miRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 1240.00 0.86 6.12 73.59 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 21.00 0.01 0.10 100.0 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 2.00 0.00 0.01 100.0 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 145.00 0.10 0.72 64.44 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 65.00 0.05 0.32 100.0 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 177.00 0.12 0.87 98.88 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 547.60 0.38 2.70 52.4 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 1659.00 1.15 8.18 47.47 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 58.00 0.04 0.29 81.69 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 8.00 0.01 0.04 100.0 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 6605.00 4.59 32.58 78.25 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 394.01 0.27 1.94 52.89 RNA5S12-201 rRNA spleen (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 483.00 39.20 2.38 100.0 Y_RNA.14-201 misc RNA spleen (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 5.00 0.75 0.02 100.0 RNU5E-1-201 snRNA spleen (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 158.00 6.48 0.78 100.0 SNORA31-201 snoRNA spleen (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 12.00 0.49 0.06 13.04 RNA5SP389-201 rRNA pseudogene spleen (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 35.00 1.44 0.17 41.18 RNA5SP389-201 rRNA pseudogene spleen (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 186.00 7.65 0.92 100.0 RNA5SP389-201 rRNA pseudogene spleen (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1610.27 2.17 7.94 66.4 RNU5A-1-201 snRNA spleen (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 12973.00 17.46 64.00 70.03 RNU5A-1-201 snRNA spleen (Tissue)